Current Proteomics
Volume 19, 5 Issues, 2022
ISSN: 1875-6247 (Online)
ISSN: 1570-1646 (Print)
This journal supports open access
ISSN: 1875-6247 (Online)
ISSN: 1570-1646 (Print)
This journal supports open access
Announcement for Authors
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Aims & Scope
Research in the emerging field of proteomics is growing at an extremely rapid rate. The principal aim of Current Proteomics is to publish well-timed in-depth/mini review articles in this fast-expanding area on topics relevant and significant to the development of proteomics. Current Proteomics is an essential journal for everyone involved in proteomics and related fields in both academia and industry.
Current Proteomics publishes in-depth/mini review articles in all aspects of the fast-expanding field of proteomics. All areas of proteomics are covered together with the methodology, software, databases, technological advances and applications of proteomics, including functional proteomics. Diverse technologies covered include but are not limited to:
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In addition to in-depth/mini reviews, articles highlighting recent proteomics papers of special interest as well as book reviews are published. Mini-reviews and perspective articles are also published. In view of the importance of specific technology and software developed for advancement of proteomics research, a separate section is devoted to product and technology reports. Proceedings of proteomics meetings with selected review articles on topics presented are also published.
Current Proteomics
,Volume 19
-Number 3
Biography
Research Article
Proteomic Analysis of Early Phosphorylated Proteins in Acute Pancreatitis Model
, 19(3): 198 - 217Pengcheng Zhang, Yuan Zhou, Qiangqiang Fang, Houmin Lin and Juan Xiao*
DOI: 10.2174/1570164618666211130144858
Research Article
Cloning, Expression and Biochemical Characterization of the Recombinant α-amylase from Bacillus subtilis YX48
, 19(3): 218 - 225Yan Shan , Junjie Shang *, Dongfang Zhang , Yinshan Cui , Yi Wang , Jie Zhu, Yongkai Ma, Pengfei Song , Kunhao Qin, Xiuling Ji, Yunlin Wei* and Lijun Wu
DOI: 10.2174/1570164618666210726161428
Research Article
Plasma Apolipoprotein-AIV Downregulated in Patients with Major Depressive Disorder having Suicidal Ideation Compared to those without Suicidal Ideation
, 19(3): 226 - 231Boby Mathew, Krishnamachari Srinivasan, Johnson Pradeep, Tinku Thomas and Amit Kumar Mandal*
DOI: 10.2174/1570164618666211104151005
Research Article
Subcellular Proteomic Analysis Reveals Dysregulation in the Organization of Human A549 Cells Infected with Influenza Virus H7N9
, 19(3): 232 - 242Lin Yin, Siyuan Liu, Huichun Shi, Yanling Feng, Yujiao Zhang, Dage Wu, Zhigang Song and Lijun Zhang*
DOI: 10.2174/1570164619666211222145450
Research Article
iTRAQ-Based Quantitative Proteomics Analysis Reveals the Invasion Mechanism of Spiroplasma eriocheiris in 3T6 Cells
, 19(3): 243 - 255Peng Liu, Youyuan Ye, Shasha Xiang, Yuxin Li, Chengbin Zhu, Zixu Chen, Jie Hu, Ye Gen, Li Lou, Xuqi Duan, Juan Zhang* and Wei Gu*
DOI: 10.2174/1570164619666220113154423
Research Article
A Motif in Metallopeptidase Inhibitor Decreases Effectively the Activity of Macrophage Metalloproteinases
, 19(3): 256 - 261Golnaz Esfandiari, Ghasem Ghasempour, Naser Kakavandi, Ali Akbar Soleimani, Borhan Rahimi Abkenar, Elham Bahraini, Mohammad Najafi* and Mohsen Khosravi
DOI: 10.2174/1570164619666220304162545
Research Article
Proteomic Profile Analysis of Pulmonary Artery in a Rat Model Under Hypoxic Pulmonary Hypertension
, 19(3): 262 - 273Ma Shuang, Liu Jie, Zhang Ruixia, Liu Chuanchuan and Ma Yan*
DOI: 10.2174/1570164619666220204123709
Articles Ahead of Print
Proteomics, Peptidomics and Transcriptomic Analysis of the Venom from the Spider Macrothele yani (Mygalomorphae: Macrothelidae)
Xiao-Liang Gu, Ying Wang, Cheng-Gui Zhang, Xiu-Mei Wu, Huai Xiao, Yin-He Yang, Da-Song Yang, Zhi-Bin Yang, Yu Zhao* and Zi-Zhong Yang*
DOI: 10.2174/1570164619666220430151150
View Abstract
Proteomic Analysis of Tumor-specific Biomarkers in Colon Cancer
Yu-An Chien, Hsiu-Chuan Chou, Chu-Chun Yang, Yi- Shiuan Wang, Yu-Shan Wei and Hong-Lin Chan*
DOI: 10.2174/1570164619666220406115339
View Abstract
Analysis of Membrane Proteins of Streptomycin-Resistant Mycobacterium tuberculosis Isolates
Rananjay Singh, Devesh Sharma, Divakar Sharma, Mahendra Kumar Gupta and Deepa Bisht*
DOI: 10.2174/1570164619666220428082752
View Abstract
Metabolomics of Meat Color: Practical Implications
Morgan L. Denzer, Frank Kiyimba, Gretchen G. Mafi and Ranjith Ramanathan*
DOI: 10.2174/1570164619666211230153145
View Abstract
Abstracts Ahead of Print
Heavy metal stress tolerance by Serratia nematodiphila sp. MB307: insights from mass spectrometry based proteomics
Zarrin Basharat, Kyung-Mee Moon, Leonard J. Foster and Azra Yasmin*
DOI: 10.2174/1570164619666220617145437
View Abstract
Identification of human protein subcellular location with multiple networks
Rui Wang and Lei Chen*
DOI: 10.2174/1570164619666220531113704
View Abstract
Methanol and sorbitol affect the molecular dynamics of arginine deiminase: insights for improving its stability
Mahboubeh Zarei, Soudabeh Sabetian, Mohammad Reza Rahbar and Manica Negahdaripour*
DOI: 10.2174/1570164619666220513123509
View Abstract
Proteomics, Peptidomics and Transcriptomic Analysis of the Venom from the Spider Macrothele yani (Mygalomorphae: Macrothelidae)
Xiao-Liang Gu, Ying Wang, Cheng-Gui Zhang, Xiu-Mei Wu, Huai Xiao, Yin-He Yang, Da-Song Yang, Zhi-Bin Yang, Zi-Zhong Yang* and Yu Zhao*
DOI: 10.2174/1570164619666220430151150
View Abstract
Proteomics and Computational Analysis of Cytosolic Proteome of a Thermoacidophilic Euryarchaeon Picrophilus torridus
Neelja Singhal, Anjali Garg, Nirpendra Singh, Manish Kumar and Manisha Goel*
DOI: 10.2174/1570164619666220429121247
View Abstract
Identification of Potential Immunogenic Epitopes against SARS-CoV-2 using In-Silico Method: An Immunoinformatics Study
Subikshaa. S, Sathishnath. P, Chethan Jaya Sai Nandamuri, Shruti Ramanathan and Shobana Sugumar*
DOI: 10.2174/1570164619666220401115509
View Abstract
Published Contents
Editor's Choice
Prediction of Protein Structural Classes: Features Extraction to Classification Algorithm
, 2021; 18(5): 635 - 645Xiaoqing Liu, Zhenyu Yang, Yaoxin Wang and Qi Dai*
DOI: 10.2174/1570164618666210218141148
Neurochemical Changes in the Brain After Fetal Exposure to Fluoxetine, A Serotonin Reuptake Inhibitor (SRI) in Rodents
, 2021; 18(4): 499 - 504Mona Awad Alonazi, Amina El Gezeery, Afaf El-Ansary and Ramesa Shafi Bhat*
DOI: 10.2174/1570164617999201116154235
Design, Sar, and Metabolism Study of Crucifereae Family Compound (Spirobrassinin) and its Analogs for Antiangiogenic Potential Targeting Hsp90
, 2021; 18(3): 362 - 379Neha Sharma, Mohammad Faisal, Abdulrahman A. Alatar, M Kalim A Khan, Saheem Ahmad and Salman Akhtar*
DOI: 10.2174/1570164617999200731000719
Presence of Cathelicidin-1 in Milk as an Indicator of the Severity of Mammary Infection in Ewes
, 2021; 18(2): 162 - 168Angeliki I. Katsafadou, Natalia G.C. Vasileiou, George T. Tsangaris, Katerina S. Ioannidi, Athanasios K. Anagnostopoulos, Charalambos Billinis, Ilektra A. Fragkou, Elias Papadopoulos, Vasia S. Mavrogianni, Dafni T. Lianou, Dimitris C. Chatzopoulos and George C. Fthenakis*
DOI: 10.2174/1570164617999200510234638
Label-Free Mass Spectrometry-Based Plasma Proteomics Identified LY6D, DSC3, CDSN, SERPINB12, and SLURP1 as Novel Protein Biomarkers For Pulmonary Tuberculosis
, 2021; 18(1): 50 - 61Lu Zhang, Hualin Wang, Na Li, Peng Hu, Zhaoqin Zhu, Wei Wang, Yanzheng Song, Zilu Wen, Xiaoli Yu* and Shulin Zhang*
DOI: 10.2174/1570164617666191210105122
Inhibition of USP2 Induces Apoptosis through Down Regulation of Fatty Acid Synthase and Cyclin D1 in Triple Negative Breast Cancer
, 2020; 17(5): 425 - 432Nida Syed, Amber Ilyas, Farha Idrees, Shamshad Zarina and Zehra Hashim *
DOI: 10.2174/1570164617666191008093522
Platelet-Derived Growth Factors (PDGFs) are Key Players in the Stimulation of Airway Smooth Muscle Cells (ASMCs) Alteration in Asthma and Chronic Obstructive Pulmonary Disease (COPD) with Multifarious Inhibitors at an Early Stage of Development
, 2020; 17(4): 324 - 332Xiaodong Shi and Kwaku Appiah-Kubi*
DOI: 10.2174/1570164617666190906151348
Upregulated Retinol Binding Protein and Transthyretin as Predictive Biomarkers of Gestational Diabetes Mellitus
, 2020; 17(3): 180 - 190Sadaf Ilyas*, Nabila Roohi, Samina Ashraf and Sobia Alyas
DOI: 10.2174/1570164617666190822125837
Cell Penetrating Peptide: Sequence-Based Computational Prediction for Intercellular Delivery of Arginine Deiminase
, 2020; 17(2): 117 - 131Mahboubeh Zarei, Mohammad Reza Rahbar, Manica Negahdaripour, Mohammad Hossein Morowvat, Navid Nezafat* and Younes Ghasemi*
DOI: 10.2174/1570164616666190701120351
Role of Cervical Cancer Radiotherapy in the Expression of EGFR and p53 Gene
, 2020; 17(1): 23 - 29Yan Cheng, Kuntian Lan, Xiaoxia Yang, Dongxia Liang, Li Xia and Jinquan Cui*
DOI: 10.2174/1570164616666190204155403
Open Access Articles
Proteomic Analysis of Aqueous Humor Proteins Associated with Neovascular Glaucoma Secondary to Proliferative Diabetic Retinopathy
, 2021; 18(5): 717 - 729Ying Wang*, Shaolin Xu, Junyi Li, Fujie Yuan, Yue Chen and Kelin Liu
Heteromerization as a Mechanism Modulating the Affinity of the ACE2 Receptor to the Receptor Binding Domain of SARS-CoV-2 Spike Protein
, 2021; 18(5): 695 - 704Diego Guidolin*, Cinzia Tortorella, Deanna Anderlini, Manuela Marcoli, Guido Maura and Luigi F. Agnati
Comparative Proteomic Analysis of Hydrogen Peroxide-Induced Protein Expression in Streptococcus pneumoniae D39
, 2021; 18(5): 680 - 694Sungkyoung Lee, Myoung-Ro Lee, Songmee Bae* and Min-Kyu Kwak*
Proteomic Investigations to Assess the Impact of Salinity on Vigna radiata L. Genotypes
, 2021; 18(2): 106 - 112Hesham F. Alharby and Khalid Rehman Hakeem*
Role of Cervical Cancer Radiotherapy in the Expression of EGFR and p53 Gene
, 2020; 17(1): 23 - 29Yan Cheng, Kuntian Lan, Xiaoxia Yang, Dongxia Liang, Li Xia and Jinquan Cui*
Proteomic Changes Between Populus Allotriploids and Diploids Revealed Using an iTRAQ-based Quantitative Approach
, 2017; 14(3): 166 - 174Yi Wang, Yun Li, Yujing Suo, Yu Min and Xiangyang Kang*
Identification of Osteoporosis-Associated Protein Biomarkers from Ovariectomized Rat Urine
, 2017; 14(2): 130 - 137Jinkyu Lim* and Sunil Hwang
Most Cited Articles
Research Article
A binary classifier for the prediction of EC numbers of Enzymes
, 2019; 16(5): 383-391.Hao Cui and Lei Chen*
DOI: 10.2174/1570164616666190126103036
Research Article
Interaction of human herpesvirus 8 viral interleukin-6 with human interleukin-6 receptor using in silico approach: The potential role in hhv-8 pathogenesis
, 2020; 17(2): 107-116.Behzad Dehghani, Tayebeh Hashempour* and Zahra Hasanshahi
DOI: 10.2174/1570164616666190626151949
Review Article
Multi-epitope vaccines (MEVs), as a novel strategy against infectious diseases
, 2020; 17(5): 354-364.Mohammad Mahmoudi Goumari , Ibrahim Farhani, Navid Nezafat and Shirin Mahmoodi*
DOI: 10.2174/1570164617666190919120140
Research Article
Antibody development to HCV alternate reading frame protein in liver transplant candidate and its computational analysis
, 2020; 17(2): 154-170.Zahra Musavi, Tayebeh Hashempour*, Javad Moayedi, Behzad Dehghani, Farzaneh Ghassabi, Mehrdad Hallaji, Seyed Younes Hosseini, Ramin Yaghoubi , Siavash Gholami, Mohamad Ali Dehyadegari and Shahin Merat
DOI: 10.2174/1570164617666190822103329
Review Article
Bioinformatics and therapeutic insights on proteins in royal jelly
, 2019; 16(2): 84-101.Md. Sakib Hossen, Taebun Nahar, Siew Hua Gan* and Md. Ibrahim Khalil*
DOI: 10.2174/1570164615666181012113130
Research Article
Proteomic analysis of a bioactive aloe vera extract
, 2019; 16(3): 181-187.Ethel Daniela Cabello-Ruiz, Víctor Manuel Torres-de la Cruz*, Catalina Rivas-Morales, Gloria María Molina-Salinas, María Adriana Núñez-González, María Julia Verde-Star and Catalina Leos-Rivas
DOI: 10.2174/1570164615666180925150839
Research Article
An improved scatter search algorithm for parameter estimation in large-scale kinetic models of biochemical systems
, 2019; 16(5): 427-438.Muhammad Akmal Remli, Mohd Saberi Mohamad*, Safaai Deris, Richard Sinnott and Suhaimi Napis
DOI: 10.2174/1570164616666190401203128
Research Article
Differential protein expression in Shewanella seohaensis decolorizing azo dyes
, 2019; 16(2): 156-164.Nadine Ana de Souza, Nagappa Ramaiah*, Samir Damare, Bliss Furtado, Chellandi Mohandass, Anushka Patil and Marsha De Lima
DOI: 10.2174/1570164615666180731110845
Research Article
Identification of DNA-binding proteins by multiple kernel support vector machine and sequence information
, 2020; 17(4): 302-310.Yijie Ding, Feng Chen, Xiaoyi Guo*, Jijun Tang and Hongjie Wu*
DOI: 10.2174/1570164616666190417100509
Research Article
Cell penetrating peptide: Sequence-based computational prediction for intercellular delivery of arginine deiminase
, 2020; 17(2): 117-131.Mahboubeh Zarei, Mohammad Reza Rahbar, Manica Negahdaripour, Mohammad Hossein Morowvat, Navid Nezafat* and Younes Ghasemi*
DOI: 10.2174/1570164616666190701120351
Research Article
Computational analysis of therapeutic enzyme uricase from different source organisms
, 2020; 17(1): 59-77.Anand Kumar Nelapati and JagadeeshBabu PonnanEttiyappan*
DOI: 10.2174/1570164616666190617165107
Research Article
Assessment of signal peptides to optimize interleukin 2 (IL-2) folding and expression
, 2019; 16(3): 188-198.Narges Nazifi, Mojtaba Tahmoorespur*, Mohammad Hadi Sekhavati*, Alireza Haghparast and Mohammad Ali Behroozikhah
DOI: 10.2174/1570164615666181024113612
Research Article
In silico and in vitro evaluation of deamidation effects on the stability of the fusion toxin DAB<inf>389</inf>IL-2
, 2019; 16(4): 307-313.Nasrin Zarkar, Mohammad Ali Nasiri Khalili*, Fathollah Ahmadpour, Sirus Khodadadi and Mehdi Zeinoddini
DOI: 10.2174/1570164616666190131150033
Research Article
An iTRAQ based comparative proteomic profiling of thermotolerant saccharomyces cerevisiae JRC6 in response to high temperature fermentation
, 2019; 16(4): 289-296.Jairam Choudhary, Surender Singh*, Rameshwar Tiwari, Renu Goel and Lata Nain
DOI: 10.2174/1570164616666190131145217
Research Article
Proteomic analysis of the vitreous body in proliferative and non-prolifer-ative diabetic retinopathy
, 2021; 18(2): 143-152.Van-An Duong, Jeeyun Ahn, Na-Young Han, Jong-Moon Park, Jeong-Hun Mok, Tae Wan Kim* and Hookeun Lee*
DOI: 10.2174/1570164617666200302101442
Most Accessed Articles
Identifying Protein Subcellular Location with Embedding Features Learned from Networks
, 2021; 18(5): 646-660.Liu, Hongwei; Hu, Bin; Chen, Lei; Lu, Lin
DOI: 10.2174/1570164617999201124142950
Multi-Epitope Vaccines (MEVs), as a Novel Strategy Against Infectious Diseases
, 2020; 17(5): 354-364.Goumari, Mohammad Mahmoudi; Farhani, Ibrahim; Nezafat, Navid; Mahmoodi, Shirin
DOI: 10.2174/1570164617666190919120140
Interaction of Human Herpesvirus 8 Viral Interleukin-6 with Human Interleukin-6 Receptor Using In Silico Approach: The Potential Role in HHV-8 Pathogenesis
, 2020; 17(2): 107-116.Dehghani, Behzad; Hashempour, Tayebeh; Hasanshahi, Zahra
DOI: 10.2174/1570164616666190626151949
Distorted Key Theory and its Implication for Drug Development
, 2020; 17(4): 311-323.Chou, Kuo-Chen
DOI: 10.2174/1570164617666191025101914
Cell Penetrating Peptide: Sequence-Based Computational Prediction for Intercellular Delivery of Arginine Deiminase
, 2020; 17(2): 117-131.Zarei, Mahboubeh; Rahbar, Mohammad Reza; Negahdaripour, Manica; Morowvat, Mohammad Hossein; Nezafat, Navid; Ghasemi, Younes
DOI: 10.2174/1570164616666190701120351
Proteomic Analysis of the Vitreous Body in Proliferative and Non-Proliferative Diabetic Retinopathy
, 2021; 18(2): 143-152.Duong, Van-An; Ahn, Jeeyun; Han, Na-Young; Park, Jong-Moon; Mok, Jeong-Hun; Kim, Tae Wan; Lee, Hookeun
DOI: 10.2174/1570164617666200302101442
Chemoprotective Effects of Propolis on Aflatoxin B1-Induced Hepatotoxicity in Rats: Oxidative Damage and Hepatotoxicity by Modulating TP53, Oxidative Stress
, 2020; 17(3): 191-199.Yilmaz, Seval; Kandemir, Fatih Mehmet; Kaya, Emre; Ozkaraca, Mustafa
DOI: 10.2174/1570164617666190925121720
Identification of DNA-Binding Proteins by Multiple Kernel Support Vector Machine and Sequence Information
, 2020; 17(4): 302-310.Ding, Yijie; Chen, Feng; Guo, Xiaoyi; Tang, Jijun; Wu, Hongjie
DOI: 10.2174/1570164616666190417100509
In Silico Design of Chimeric and Immunogenic Protein-Containing IpaB and IpaD as a Vaccine Candidate against Shigella dysenteriae
, 2020; 17(4): 333-341.Arianzad, Seyed Akbar; Zeinoddini, Mehdi; Haddadi, Azam; Nazarian, Shahram; Sajedi, Reza Hasan
DOI: 10.2174/1570164617666190906145843
Computational Analysis of Therapeutic Enzyme Uricase from Different Source Organisms
, 2020; 17(1): 59-77.Nelapati, Anand Kumar; PonnanEttiyappan, JagadeeshBabu
DOI: 10.2174/1570164616666190617165107
Varlitinib Mediates Its Activity Through Down Regulating MAPK/EGFR Pathway in Oral Cancer
, 2020; 17(1): 51-58.Usman, Muhammad; Tanveer, Fariha; Ilyas, Amber; Zarina, Shamshad
DOI: 10.2174/1570164616666190516114749
The Effect of Relaxation Technique (Jacobsen and Benson) on Depression, Anxiety, and Stress in Patients with Multiple Sclerosis
, 2020; 16(3): 213-219.Akbari, Ali; Ahmadi, Forouzan; Jalili, Ebrahim; Khazaei, Salman
DOI: 10.2174/2666082216999200819105928
Prediction of Nitration Sites Based on FCBF Method and Stacking Ensemble Model
, 2021; 18(5): 669-679.Liu, Min; Zhang, Lu; Qin, Xinyi; Huang, Tao; Xu, Ziwei; Liu, Guangzhong
DOI: 10.2174/1570164618999210101222637
Impact of COVID-19 on Mental Dimension of Health: A Sensitive Issue to be Addressed at the Earliest
, 2020; 16(3): 158-166.Nepal, Sunil; Nepal, Sudip; Shastry, Chakrakodi S.; Chand, Sharad; Nandakumar, U.P.; Pant, Bishnu Dev; Khanal, Pukar; Rawal, Kala Bahadur
DOI: 10.2174/2666082216999200918162639
Comparative Studies on Phospholipase A2 as a Marker for Gut Microbiota-liver-brain Axis in a rodent Model of Autism
, 2021; 18(2): 169-177.Al-Dbass, Abeer; Bacha, Abir Ben; Moubayed, Nadine M.S.; Bhat, Ramesa Shafi; Al-Mutairi, Manar; Alnakhli, Osima M.; Al-Mrshoud, Majidh; Alfawaz, Hanan; Daghestani, Maha; El-Ansary, Afaf
DOI: 10.2174/1570164617999200519100634
Editor-in-Chief
Ajoy Basak
Department of Pathology and Laboratory Medicine
Ottawa Hospital Research Institute
University of Ottawa
Ottawa, ON
(Canada)
Biography
Department of Pathology and Laboratory Medicine
Ottawa Hospital Research Institute
University of Ottawa
Ottawa, ON
Biography
Biography of Ajoy Basak
Dr. Basak is an Adjunct Professor in Pathology and Laboratory Medicine Department, Faculty of Medicine, U Ottawa, Canada. He is also a Scientist, Natural Pharmasciences Research & Development Inc, Ottawa as well as an Affiliate Investigator, Ottawa Hospital Research Institute. He has more than 30 years of experience in research, teaching and drug design aimed at the treatment, detection and diagnosis of illnesses like neurological disorders, hypercholesterolemia/CVD, infectious disease, cancer and pregnancy disorders. Also Dr. Basak has authored more than 140 manuscripts, 170 conference presentations, 22 proceedings, supervised >75 graduate, undergraduate and post-doctoral students for Honors, Masters, PhD and MD degrees.
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